Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929770.1_cds_XP_016477002.1_68781
CDS Infomation

[gene=LOC107798511] [db_xref=GeneID:107798511] [protein=sister chromatid cohesion 1 protein 2-like] [partial=3'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016477002.1] [location=complement(join(<419..530,773..1296,1373..1431,2010..2053,2121..2158,2290..2420,2508..2575,3633..3756))] [gbkey=CDS]
Sequence

ATGTTTTACTCACAGTTTCTACTTTCAAAGAAGGGGGCTTTACGCACCATTTGGTTTGCT
GCTCATTTTCATAAACGCCTCAAGAAGGACCAAGTTCAGCAAACTAACATCCCTTCTTCT
GTTGATAAAATTCTGAAGGATGGAGCTCCTGTGGTTACCTACAGAATTTTAGGTCCCCTG
CTCCTGGGTGTGAGATCAACTAGCAAACTATCAGCTCTAAGGATTGAGGGTCTGCGTGCT
CCTAACTGCTTTATCAAACGACCAAAGAAATTTGAACTGGATACTTTTGAATTGGAAGTC
TTGGAAGATCAAAATGCAAGCAGTGGTCATGTGGCATCTCGTGAAGAAATTATGCTTTCA
GATGCTTGGAGAAGTGAGCAAACACGCTTGGGCTTATCTAGCAAGTACGAGGAAGATGTC
TCTCGTTCAGAGTCTTTGACCACAGATCACACTCCAGTTAGAGACGTATGTTCGCCTCAT
CTGATGGACAAAGATGTTCACTTCCGCCCATCACTTGGCTCAGGCCACTTGGCAGCACTG
TGGCACCTTAATGGGACTAGGTTCTCCTTAGAAGAGCGCTTTGAACCTATGACATTTGGG
GACCTTGATTTTCAGATGACCTCTGATAAGACAGCTGATCACCAGACTGATGAGCAGATG
AAAGAGTCTAATGCTGGGAACTTGGTAAATGAGGAGCATTTGTCATCATTGGAAGAACAC
GCAGAACCAATGATTACCGTAAACGCTGAAGCAGGAACCAATATTAGTCAACAATCTGAG
AAAATTCGTCAGCCAATTGGGCTCTTAAAACACCCTGATACAGGAGGGGATGTAGATGAT
GAAGGACCAGCAGGCGTTGGTGAATCATTCTCCGTGGAAAAGCAACAAAAGAAAAATGCT
GAAGCATCTTCCTCTAGAAATGGGAAGGATCGGACTGAACATGATCGCTCCCTCTGTATT
GATGTACACCCAGATATCAAGCTCTCAGGATCTACATCACCAGATTTCATATCTGTTCGC
ACCCCAGCTACCAAAGAGCGTACTCGGATTTCAAGGAAGCGGAGGTGCATATTTGATGAT
TCTATCGTCATCTCAAACGA

Peptide Sequence

PEP ID

XP_016477002.1
PEP Infomation

PREDICTED: sister chromatid cohesion 1 protein 2-like, partial [Nicotiana tabacum]
Sequence

MFYSQFLLSKKGALRTIWFAAHFHKRLKKDQVQQTNIPSSVDKILKDGAPVVTYRILGPL
LLGVRSTSKLSALRIEGLRAPNCFIKRPKKFELDTFELEVLEDQNASSGHVASREEIMLS
DAWRSEQTRLGLSSKYEEDVSRSESLTTDHTPVRDVCSPHLMDKDVHFRPSLGSGHLAAL
WHLNGTRFSLEERFEPMTFGDLDFQMTSDKTADHQTDEQMKESNAGNLVNEEHLSSLEEH
AEPMITVNAEAGTNISQQSEKIRQPIGLLKHPDTGGDVDDEGPAGVGESFSVEKQQKKNA
EASSSRNGKDRTEHDRSLCIDVHPDIKLSGSTSPDFISVRTPATKERTRISRKRRCIFDD
SIVISNEVYKRWIGDANDLVCKRRKAPHTSYLARKVHKISSLPQSFEEPLIPCGDSIDII
SAICKIRSTRDGPAETVEVPPHEEIPGSPNTLRYGEQIPGSSATSMQEDIPIAPLSSLRE
DIPESPGKLRCEEQIPIAPAPPLHVGIPESPNTLRYDGEQTPIAPATPVTGSSSLRFHDM
QGISRSHNEPASSTESTKEGAPQMEVQELEMDLMD

Transcript Sequence

Gene sequence data has not been registered.